"An integrative resource for genome-scale data from vertebrate species."

"Metal IonsinNucleic AcidS."

"A web resource on systems-level properties of cancer genes"

"Web-based neuroscience resources: data, materials, and tools"

"MEGARes is an antimicrobial resistance database made for high throughput sequencing based at Colorado State University"

"microRNAexpression and sequence analysis."

"For comparative metagenomic studies"

"repository of chemical entity information as well astandem mass spectrometrydata"

"Superfamily ofMajor intrinsic proteins."

"A database that documents and tracks tuberculosis antibiotic resistance genes."

"For automatically or semi-automatically identifying metabolites in complex biofluids from 2D NMR spectra"

"For metabolomic data analysis – specifically for the identification of enriched or important pathways from multiple different organisms"

"Database for singlecytosineresolutionDNA methylationdata and associated annotations."

"DNA methylationdata."

"polymorphisms in microRNA target sites with complex traits."

"orthologous U12-type spliceosomal introns."

"Transcriptional Regulatory Associations in Saccharomyces cerevisiae"

"biological pathways."

"tRNAgene database"

"Structure Validation Server"

"amino acid tandem repeats inproteins."

"Tandem repeats"

"Database of Beta-lactamases which show function and structure."

"Tools for navigating, visualizing, and analyzing the underlying databases, and for analyzing omics data"

"BioGRID is a biomedical interaction repository with data compiled through comprehensive curation efforts."

"Bittercompounds."

"protein-protein interaction database for theDeath Domainsuperfamily."

"Online repository for immune gene frequencies in worldwide populations"

"AMDD is the consolidation of all antimicrobial drug resources for the purpose of treating resistant microbes."

"quality assessedprotein-protein interactionsin nine species."

"The Human Protein Atlas portal is a publicly available database with millions of high-resolution images showing the spatial distribution ofproteins in normal human tissues and different cancer types, as well the sub cellular localisation in single cells."

"The Beta-Lactamase Database (BLAD) provides 3D structural information specifically on beta-lactamases and is updated regularly."

"The Pfam database provides alignments and hidden Markov models for protein domains."

"Database of Antimicrobial Resistance genes."

"The Rfam database provides alignments, consensus secondary structures and covariance models for RNA families."

"experimentally characterized protein annotations."

"A database providing quantitative genomic, proteomic, and metabolomic data of E. coli."

"disease-annotatedchromatinepigeneticsresource."

"databases of aberrant 3'- and 5'-splicesites."

"DataBase ofTranscriptionalStart Sites"

"predicted and knowninteractionsbetweenprotein domains"

"Japanese DNA data bank"

"UniProt is the Universal Protein resource, a central repository ofproteindata created by combining the Swiss-Prot, TrEMBL and PIR-PSDdatabases."

"chromosomal rearrangements in human diseases."

"duplicated genenucleotide variants in the human genome."

"Single Nucleotide PolymorphismDatabase"

"The dcGO database is a comprehensive domain-centric ontology resource for protein domains."

"comprehensive collection of known and predicted domain-domain interactions."

"E. coli metabolite structures, metabolite descriptions, metabolite reactions, metabolite enzymes and transporters, E. coli enzyme and transporter sequences, chemical properties, nomenclature, synonyms, chemical taxonomy, metabolite NMR spectra, metabolite GC-MS spectra, metabolite LC-MS spectra"

"Database focused on documentation of eight bacterial pathogens in the EU."

"Integrated microbial genomes database and comparative analysis system"

"Open source data warehouse system for the integration and analysis of biological data."

"database ofinterferonregulated genes"

"Non-Profit Open Access Knowledge Management System for Aging Research"

"International Knockout Mouse Consortium"

"Encyclopaedia ofphenotypes from knockout mice."

"Standardized protocols for phenotyping mutant mouse strains."

"introns andalternative splicinginCaenorhabditis elegans."

"an open-access database of transcription factor binding profiles"

"annotation and prediction of activeLINE-1elements."

"alternative splicingin the context ofprotein structures."

"ultraconserved sequencesdatabase."

"β-barrelouter membrane proteins ."

"nuclear receptors."

"transcription terminatordatabase."

"Similar interactions of homologous proteins in multiple crystal forms"

"Protein–RNAInterface Database."

"circular dichroismspectral and metadata."

"pseudogeneannotation."

"comparative genomics for Pseudomonas genomes."

"Chemicals and their bioassays"

"Transcription Factor Database"

"A wiki-based resource for collection, maintenance and distribution of biological pathways"

"Metabolomics database"

"mRNAalternative splicingin human genome."

"Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis"

"Chemicals database targeted towards the environmental sciences and providing access to over 875,000 chemical compounds, properties, bioassay data and associated information. Searches"

"human functional interaction networks."

"Data aboutsingle-span (bitopic) transmembrane proteinsin genomes"

"disease chemical biology database"

"A chemical structure database providing fast access to over 100 million structures, properties and associated information."

"an annotation database forpathogens."

"Online service and database for matching clinicians based on genes of interest"

"Gene expression profiling and RNA methylation database"

"Genetic codes"

"Proposed prokaryotic nomenclature"

"Nucleic AcidPhylogenetic ProfileDatabase."

"The database provides spatial arrangement ofproteinsin thelipid bilayer"

"sequence annotation and analysis in patents."

"operonorganizations"

"virus diversity."

"Catalog of all known human genes and genetic phenotypes."

"predicted cellular targets of host and viralmiRNAs."

"syntheses, chemicals and reactions in patents. It is maintained by the University of Toronto."

"proteinfunctional sites oneukaryoticgenes."

"For protein chemical shift re-referencing"

"Database focused on the discovery and annotation of novel gene cassettes and other transposable elements."

"A database for DNA restriction enzymes"

"DNA repairpathways."

"decoding the landscape of RNA modifications identified from high-throughput sequencing datasets."

"Secondary StructureMotifs inRNA"

"alternative tandemsplice sites."

"predictedsecreted bacterial proteins."

"Ensembl"

"full-lengthcDNAs ofapicomplexaparasites"

"Functional ElementSNPsDatabase in humans."

"genome resource on the plant pathogen Fusarium graminearum."

"Encyclopædia of genes and gene variants"

"Nucleotide sequences for more than 300,000 organisms with supporting bibliographic and biological annotation."

"Ensembl"

"OMIM is a compendium of human genes and genetic phenotypes."

"UniProt is the universal protein resource, a central repository ofproteindata created by combining the Swiss-Prot, TrEMBL and PIR-PSDdatabases."

"Integrates human gene-disease associations"

"The Rat Genome Database"

"Resource withcontrolled vocabularyto describe the function ofgenes andgene products"

"plant lncRNA annotation and sequences"

"integrated tools for genome annotation"

"Interactive zoomable high-resolution digital brain atlas"

"conformational dynamics of proteins and supramolecular protein assemblies."

"conopeptidedatabase."

"Convergence towards a standard set of gene annotations"

"Conserved Domain Database for the functional annotation of proteins."

"Crystalstructures and platform for world-wide collaboration"

"Lipidomics"

"Database of Beta-lactamases that allows reconciliation of TEM Beta-lactamase information against NCBI"

"Transcriptional regulation of Escherichia coli K-12"

"mimotopedatabase"

"prokaryoticglycoproteins."

"Collaborative annotation environment forstructural genomics"

"DNA replication origindatabase."

"Catalog ofOrthologs."

"animaltranscription factordatabase."

"resource for spider toxin sequences and structures."

"Long non-coding RNAs."

"MEROPS: the database ofproteolytic enzymes, their substrates and inhibitors."

"prokaryoticmicrosatellites."

"Chemical structure"

"Cheminformatics"

"Drug discovery"

"Materials science"

"Metalorganic"

"Molecular structure elucidation"

"Organic compound"

"Organometallic"

"X-ray crystallography"

"fusion sequences."

"Free source of benchmark images to validate colocalization influorescence microscopystudies"

"functional annotationofprokaryotic genomes."

"proteinlysineacetylation."

"The Comprehensive Antibiotic Resistance Database provides data, models, and algorithms relating to the molecular basis of antimicrobial resistance."

"Chemical database"

"protein and associated nucleotide domains with inferred trees."

"The PANTHER database classifies gene products into families"

"Pathogen-Host Interactions database"

"X-ray crystallography"

"Protein structure"

"NMR Structure Determination"

"Search Tool for the Retrieval of Interacting Genes/Proteins"

"microRNA-mRNAinteraction maps from Argonaute CLIP-Seq and Degradome-Seq data."

"The SUPERFAMILY database provides structural and functional annotation for all proteins and genomes."

"web based mass spectrometry (MS) proteomics analysis tool"

"a community resource and onlinemodel organism databaseof genetic and molecular biology data for the model plant Arabidopsis thaliana, commonly known as mouse-ear cress."

"Drug target database"

"extracellularmatrix interactions database."

"Medical Subject Headings"

"microRNA database"

"functional annotation ofmicroRNAs."

"microRNAsearch and annotation."

"Experimentally validatedmicroRNA-target interactions (MTIs)."

"Contains AR determinants and curated AR genes identified from metagenomics"

"In silico tool to predict the disease-causing potential of DNA variants"

"A database of toxins, virulence factors and antibiotic resistance genes"

"myExperiment"

"Databases to categorize autophagy-related genes and proteins"

"A large and extensively accessed biological database about fishes ofBangladesh"

"Protein Structure Classification"

"TopFIND is the Termini oriented protein Function Inferred Database, a central resource ofproteindata integrated with knowledge onproteintermini, proteolytic processing byproteases, terminal amino acid modifications and inferred functional implications created by combining community contributions with theUniProtandMEROPSdatabases."

"DataONE, data on the Earth, Life, and the Environment"

"bacterialgroup II introns."

"protein interaction database"

"protein conformationaldiversity."

"Group I IntronSequence and Structure Database."

"Medical database, and encyclopedia for medicine in English"

"G protein-coupled receptordata, web tools & diagrams"

"annotation resource for human genes and transcripts."

"Histoneproteins and histone modifying enzymes."

"Chemical pharmacology and toxicology data"

"high-throughput and curated data onlaminins."

"A global online database aboutichthyoplanktonand fish fry"

"experimental annotations of localization"

"database expansion and significantly improved reduction of false-positive predictions from consensus sequences."

"MirGeneDB is a database of manually curated microRNA genes that have been validated and annotated by experts."

"RNAhelicasedatabase."

"predictednon-B DNA-forming motifsin mammalian genomes."

"For predicting protein subcellular localizations"

"epigenomicdata sets."

"The Plant Ontology"

"Pathway database"

"short tandem repeatDNA database"

"Type 2toxin-antitoxinloci"

"comprehensive investigation ofAU-rich elements."

"ASD: a comprehensive database of allosteric proteins and modulators."

"Alternative splicingprediction"

"comparative genomicsof alternativesplicing."

"Alternative splicingandtranscriptdiversity database"

"functional genomic resources for Amoebozoa"

"identification and classification ofdomain-based interactions of knownthree-dimensional structure."

"Drug database"

"genome annotation foralternative splicing."

"databases ofalternatively splicedhuman genes."

"e-Mouse Atlas of Gene Expression"

"Unified Data Resource forCryoEM."

"Whole-genome database"

"comprehensive database of Escherichia coli biology."

"Europe PMC: a full-text literature database for the life sciences and platform for innovation"

"database of protein-coding intron-containing genes."

"Gene expression across species and conditions"

"genetic variation allelefrequencies."

"functional repeats in mousecDNAs."

"database of protein fragments"

"NucleosomePositioning Region Database."

"PROSITE, a protein domain database for functional characterization and annotation."

"Naturalcarbohydratestructures withNMR, bibliographic and biological annotations."

"Cellosaurus: a knowledge resource on cell lines"

"Database of macronuclear and micronuclear genes inspirotrichousciliates."

"DiProDB: a database for dinucleotide properties."

"genome portal for the Amoebozoa."

"Gene Disease Database"

"Manually curated database of Intrinsically Disordered Proteins (IDPs) and regions (IDRs)"

"A database of detailed food component with information on the known health effects"

"carbohydrate structures."

"curated database of histone proteins and their variants"

"integrative islands inprokaryoticgenomes"

"functionally related proteins acrossPPInetworks."

"Bioinformatics resource for deciphering the genome"

"metabolic pathwaydatabase"

"An ontology providing support in unambiguously referring to simulation algorithms when describing a simulation experiment."

"Medical subject headings."

"Prokaryotic nomenclature"

"frameshifting, bypassing andcodonredefinition used forgene expression."

"Chemical Shift database"

"An online, open-access portal to pharmacological information on all the human targets of prescription drugs"

"HGNC is responsible for approving unique symbols and names for human loci, including protein coding genes, RNA genes and pseudogenes, to allow unambiguous scientific communication."

"The  Atlas  is a peer reviewed on-line journal / encyclopedia / database in open access dealing with chromosomes, genes and cancers and the biology of normal and cancerous cells."

"molecularandbiochemicalinformation on enzymes that have been classified by theIUBMB"

"ontology of all organisms forenzymesources."

"theBacterial proteintYrosine Kinasedatabase."

"information aboutbacterialandarchaealstrains"

"A database of annotated bacterial genomes and their chromosome/genome maps"

"resources for insect species of the orderHymenoptera."

"Protein Structure Evaluation Suite & Server"

"sequence and domain context of polyglutamine repeats in proteins."

"regulatory sequences and interactions"

"curated database of phylogenetic trees of animal gene families."

"Tool that annotates variants and predicts their coding effects."

"microsatellite-SNP markers."

"ARabidopsis Tiling-Array-based Detection of Exons"

"Atlas of UTR Regulatory Activity"

"amino acidsmatrices."

"ABCdb database on ABC transporter systems in prokaryotic genomes."

"CLAssification ofmobile genetic elements"

"A database that tracks antibiotic resistance genes."

"Database focused on crowd-sourced curation of ARG pulled from multiple sources."

"functional genomics resource for agriculture."

"Chemical database"

"Biological database"

"Chemical database"

"Bio2RDF"

"The Life Science Web Service Registry"

"A repository for storing, exchanging and retrieving computational models of biological interest."

"A database containing aggregated information pertaining to reference samples and samples stored in theEuropean Bioinformatics Instituteassay databases."

"Repository ofNMRdata from biological molecules"

"biomolecule stretching database."

"Chemogenomics resource for neglected diseases"

"database of experimentally validated TF-binding sites"

"Echinobase: The Echinoderm Knowledgebase."

"Database of orthologous proteins and functional annotations at multiple taxonomical levels."

"Comparative relational database of alternative splicing."

"Total Integrated Archive of Short-Read and Array"

"thioester-active enzymes."

"Tree of Life Web Project"

"Zebrafish Model Organism Database."

"MobiDB database of protein disorder and mobility annotations"

"Database of comparative protein structure models"

"vectorcontamination"

"Reactome: a database of reactions, pathways and biological processes."

"Receiver operating characteristic curve testing of metabolomics clustering"

"curated non-redundant sequence database of genomes."

"For automated bacterial genome annotation and chromosomal map generation"

"database of variations in the genes that encode antigens of blood group systems"

"Protein–protein interaction database linking structural biology with functional genomics"

"database forcoronary artery diseasegenes."

"carbohydrate-active enzymes database"

"Beta-lactamase database annotating beta-lactamase based on their characteristics"

"For visualizing circular genomes"

"Experimentally determined binding sites ofRNA-binding proteins."

"Catalogue Of Somatic Mutations In Cancer"

"copy numberalterations ofcancergenome fromSNP arraydata."

"repository of large-scale omics data, bioinformatic analyses and curated annotation"

"humanmeiotic recombinationhot spots."

"alternative splicing database of completely sequenced and manually annotated full-length cDNAs"

"Metabolomics database"

"HORDE is a database of information about Olfactory Receptors"

"Whole-proteome characterization"

"Database focused on documentation of multi-drug resistant Escherichia coli."

"Apolygenic risk scorecalculator for human diseases and traits"

"Biodatabase"

"InterPro functionally analyzes protein sequences and classifies them intoprotein familieswhile predicting the presence ofdomainsand functional sites."

"Database ofmetabolic pathways and enzymes"

"Metabolomics database"

"neXtProt: exploring the universe of human proteins"

"Dynamic lexicon of neuroscience terms in aSemantic wiki"

"orthologyinference among 1000 complete genomes."

"Cancer-related proteins and compounds"

"Canto is a web-based community curation tool for gene-specific data"

"genes involved incervix cancer."

"Biological sequence ontology"

"WormBase: a comprehensive resource for nematode research."

"Xenbase: The Xenopus Model Organism Knowledgebase."

"Knowledge Network Miner"

"multi-genome catalog of putativetranscription factorbinding sites."

"For metabolomic data analysis – specifically for the identification of obvious as well as ‘subtle but coordinated’ changes among a group of related metabolites"

": curated databases and comprehensive secondary data resources"

"BAM data"

"FASTQ Sequences"

"Identification schemeforprotein domains."

"a database of tissue-specific human enhancers."

"curated signal transduction pathways."

"Comprehensive Hierarchical Nomenclature for Structures of the Primate Brain (human and macaque)"

"X-ray crystallography"

"Protein structure"

"NMR Structure Determination"

"natural and artificialsweetening agents."

"The UCSC Genome Browser"

"eukaryotic linear motifs."

"Database of experimentally defined eukaryotic  RNA Polymerase II promoters"

"Comprehensive archive of nucleotide sequences, annotations and associated data."

"Biomedical ontology"

"Compilation of publicly available predicted proteins and DNA elements that confer Antibiotic Resistance, regulatory elements and mobile genetic elements."

"Mobile genetic elements"

"genomic resources of humancell lines for identification."

"Database that collects and documents integrons and transposable elements conferring resistance."

"microsatellites of fully sequenced insect genomes."

"helix-packing folds intransmembrane proteins."

"Voltage-gated potassium channeldatabase."

"Forprotein chemical shift re-referencing"

"determine the biological function of eachproteininplants."

"Plasmid mapping server"

"Plasmodium genome database"

"plantmicroRNAdatabase"

"Comprehensive database covering various aspects of DNA polymerases"

"human transcription co-factors andtranscription factorinteracting proteins."

"Bioinformatics database of genetic disease data"

"Exosomal proteins, RNA and lipids database"

"A large and extensively accessed biological database about fish"

"annotation and visualization of mammaliangene promoters and ChIP-seqexperimentaldata."

"mycologicalnames and combinations, eventually combined with descriptions and illustrations"

"Pathway Interaction Database."

"next-generation sequencing single-cytosine-resolutionDNA methylationdata."

"Small molecules that have been tested against HIV and/or related opportunistic infections"

"annotation oflong noncoding RNAs."

"transposed elementsinfluence on thetranscriptome"

"database of protein-binding microarray data on protein-DNA interactions."

"synthetic genes re-designed for optimizing protein over-expression."

"3D structures and macromolecular interactions"

"Resource for information on mouse models of human cancer."

"MOPED enables discoveries through consistently processed multi-omics data"

"phosphorylation sites"

"3D structures of phosphorylation sites."

"genome-wide collections of gene phylogenies."

"The PhytoPath project collects and integrates genome-scale data from important fungal, oomycete and bacterial plant pathogens with literature-curated information on mutant phenotypes. Data are displayed using the Ensembl Genomes platform."

"polymorphic simplesequence repeatsextracted from prokaryotic genomes."

"The scientific resource forSchizosaccharomyces pombe"

"A community resource for thePopulusgenome."

"microsatellitesfromunigenes."

"yeasttranscription factorsequence specificities."

"predictedstructuresof all human proteins."

"Characterization and classification of nucleic acidvectors"

"experimentally validatedviralsiRNA/shRNA."

"A database containing information about bacteria of interest in veterinary medicine"

"a platform for3'UTRbiology inC. elegans."

"database ofprotein–protein interactions for mammalianTRP channels."

"sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs."

"database of subfamily assignments across the diverseperoxiredoxinfamily."

"Calculates structure resolution using coordinate data only"

"Toxin and toxin target database"

"virus-host evolutionary relationships."

"ThePharmacogenomicsKnowledgebase"

"The PharmVar Consortium"

"Foodpolyphenoldatabase"

"Long terminal repeat-retrotransposons"

"Plant transcript assemblies"

"computationally annotated hot spots in protein interfaces."

"Functional annotation"

"Protein Data Bank"

"Protein structure"

"Overview of the structures contained within the Protein Data Bank."

"posttranslational modificationdatabase."

"For automated torsion angle prediction from chemical shifts"

"protein subcellular localization database"

"Paramecium tetraureliagenome sequence"

"Protein Structure Classification"

"SCOP - extended"

"transcriptome"

"Uberon, an integrative multi-species anatomy ontology."

"repetitive sequences in plants."

"The Rat Genome Database"

"Transcription factors andposition weight matrices"

"Protein chemical shift calculation server"

"Database for biochemical reactions and their kinetic properties"

"awikiof humansingle-nucleotide polymorphisms and genotypes"

"highly curated humansignaling pathways."

"Raman, FT-IR, EI-MS, 1H-NMR, 13C-NMR and EPR spectra of organic compounds."

"SoyBase theUSDA-ARSsoybean genetics and genomic database"

"A database that tracks bacterial virulence factors"

"Riken integrated database of mammals."

"A global online database of information about aquatic species"

"For protein structure superposition"

"microRNAs"

"Stem Cell Lineage Database for the annotation of cell types and developmental lineages."

"YeastPromoterAtlas"