About: MethBase

An Entity of Type: work, from Named Graph: http://dbpedia.org, within Data Space: dbpedia.org

MethBase is a database of DNA methylation data derived from next-generation sequencing data. MethBase provides a visualization of publicly available bisulfite sequencing and reduced representation bisulfite sequencing experiments through the UCSC Genome Browser. MethBase contents include single-CpG site resolution methylation levels for each CpG site in the genome of interest, annotation of regions of hypomethylation often associated with gene promoters, and annotation of allele-specific methylation associated with genomic imprinting.

Property	Value
dbo:abstract	MethBase is a database of DNA methylation data derived from next-generation sequencing data. MethBase provides a visualization of publicly available bisulfite sequencing and reduced representation bisulfite sequencing experiments through the UCSC Genome Browser. MethBase contents include single-CpG site resolution methylation levels for each CpG site in the genome of interest, annotation of regions of hypomethylation often associated with gene promoters, and annotation of allele-specific methylation associated with genomic imprinting. (en)
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dbo:title	MethBase (en)
dbo:wikiPageExternalLink	http://smithlabresearch.org/software/methbase http://smithlabresearch.org/software/methbase/
dbo:wikiPageID	52439884 (xsd:integer)
dbo:wikiPageLength	2018 (xsd:nonNegativeInteger)
dbo:wikiPageRevisionID	1043440075 (xsd:integer)
dbo:wikiPageWikiLink	dbr:Next-generation_sequencing dbr:MethDB dbr:Allele dbr:DNA_methylation dbc:DNA dbc:Epigenetics dbr:Genome dbr:Genomic_imprinting dbr:Reduced_representation_bisulfite_sequencing dbc:DNA_sequencing dbr:Cytosine dbc:Genetics_databases dbr:Promoter_(genetics) dbr:CpG_site dbr:Bisulfite_sequencing dbr:UCSC_Genome_Browser dbr:File:Database.png dbr:NGSmethDB
dbp:citation	Qiang Song et al. (en)
dbp:description	Database for single cytosine resolution DNA methylation data and associated annotations. (en)
dbp:format	Trackhub on the UCSC Genome Browser (en)
dbp:laboratory	Andrew D. Smith (en)
dbp:logo	dbr:File:Database.png
dbp:organism	Arabidopsis (en) Human (en) Gorilla (en) Mouse (en) Chimpanzee (en) Rhesus Macaque (en)
dbp:released	2013 (xsd:integer)
dbp:title	MethBase (en)
dbp:url	http://smithlabresearch.org/software/methbase/
dbp:wikiPageUsesTemplate	dbt:Biodatabase-stub dbt:Infobox_biodatabase dbt:Onesource
dc:description	Database for singlecytosineresolutionDNA methylationdata and associated annotations.
dcterms:subject	dbc:DNA dbc:Epigenetics dbc:DNA_sequencing dbc:Genetics_databases
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rdfs:comment	MethBase is a database of DNA methylation data derived from next-generation sequencing data. MethBase provides a visualization of publicly available bisulfite sequencing and reduced representation bisulfite sequencing experiments through the UCSC Genome Browser. MethBase contents include single-CpG site resolution methylation levels for each CpG site in the genome of interest, annotation of regions of hypomethylation often associated with gene promoters, and annotation of allele-specific methylation associated with genomic imprinting. (en)
rdfs:label	MethBase (en)
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prov:wasDerivedFrom	wikipedia-en:MethBase?oldid=1043440075&ns=0
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foaf:homepage	http://smithlabresearch.org/software/methbase/
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