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Statements

Subject Item
dbr:SPAdes
dbo:wikiPageWikiLink
dbr:SPAdes_(software)
dbo:wikiPageRedirects
dbr:SPAdes_(software)
Subject Item
dbr:Velvet_assembler
dbo:wikiPageWikiLink
dbr:SPAdes_(software)
Subject Item
dbr:De_novo_sequence_assemblers
dbo:wikiPageWikiLink
dbr:SPAdes_(software)
Subject Item
dbr:Genome_skimming
dbo:wikiPageWikiLink
dbr:SPAdes_(software)
Subject Item
dbr:Sequence_assembly
dbo:wikiPageWikiLink
dbr:SPAdes_(software)
Subject Item
dbr:SPAdes_(software)
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rdfs:label
SPAdes (software)
rdfs:comment
SPAdes (St. Petersburg genome assembler) is a genome assembly algorithm which was designed for single cell and multi-cells bacterial data sets. Therefore, it might not be suitable for large genomes projects. SPAdes works with Ion Torrent, PacBio, Oxford Nanopore, and Illumina paired-end, mate-pairs and single reads.SPAdes has been integrated into Galaxy pipelines by Guy Lionel and Philip Mabon.
foaf:name
SPAdes
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n10:
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SPAdes
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dbc:Bioinformatics_software dbc:DNA_sequencing dbc:Bioinformatics_algorithms dbc:Metagenomics_software
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40693593
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1123484174
dbo:wikiPageWikiLink
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n21:Coverage2.jpg?width=300
dbp:developer
St. Petersburg Academic University, Russia University of California, San Diego, USA St. Petersburg State University, Russia
dbp:genre
dbr:Bioinformatics
dbp:latestReleaseDate
2021-03-08
dbp:latestReleaseVersion
3.15
dbp:license
free use
dbp:operatingSystem
Linux, Mac OS
dbp:website
n10:
dbo:abstract
SPAdes (St. Petersburg genome assembler) is a genome assembly algorithm which was designed for single cell and multi-cells bacterial data sets. Therefore, it might not be suitable for large genomes projects. SPAdes works with Ion Torrent, PacBio, Oxford Nanopore, and Illumina paired-end, mate-pairs and single reads.SPAdes has been integrated into Galaxy pipelines by Guy Lionel and Philip Mabon.
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3.15.2
dbo:developer
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