About: CollecTF

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An Entity of Type : dbo:BiologicalDatabase, within Data Space : dbpedia.org associated with source document(s)
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http://dbpedia.org/describe/?url=http%3A%2F%2Fdbpedia.org%2Fresource%2FCollecTF

CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites.

Attributes	Values
rdf:type	Thing schema:CreativeWork work wikidata:Q386724 Database dul:InformationObject Biological database
rdfs:label	CollecTF (en)
rdfs:comment	CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites. (en)
foaf:homepage	http://collectf.org http://compbio.umbc.edu/
foaf:depiction
dc:description	database of experimentally validated TF-binding sites
dcterms:subject	Biological databases
Wikipage page ID	42784181 (xsd:integer)
Wikipage revision ID	1091105184 (xsd:integer)
Link from a Wikipage to another Wikipage	Vibrionaceae Comma-separated values Comparative genomics Bacteria ARFF Biological databases FASTA format Binding sites Transcription factor RefSeq National Center for Biotechnology Information Ferric uptake regulator LexA
Link from a Wikipage to an external page	http://collectf.org/browse/release_history/ http://collectf.org http://collectf.umbc.edu http://compbio.umbc.edu/
sameAs	CollecTF CollecTF CollecTF
dbp:wikiPageUsesTemplate	dbt:Infobox_biodatabase dbt:Reflist
thumbnail	wiki-commons:Special:FilePath/Database.png?width=300
author	Kılıç, et al. (en)
description	database of experimentally validated TF-binding sites (en)
format	Comma-separated values ARFF FASTA format
logo
Organism	Bacteria
released	2013 (xsd:integer)
title	CollecTF (en)
url	http://collectf.org http://compbio.umbc.edu/
has abstract	CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites. CollecTF entries are periodically submitted to NCBI for integration into RefSeq complete genome records as link-out features, maximizing the visibility of the data and enriching the annotation of RefSeq files with regulatory information. Seeking to facilitate comparative genomics and machine-learning analyses of regulatory interactions, in its initial release CollecTF provides domain-wide coverage of two TF families (LexA and Fur), as well as extensive representation for a clinically important bacterial family, the Vibrionaceae. (en)
download	http://collectf.org/browse/release_history/
pmid	24234444 (xsd:integer)
gold:hypernym	Database
prov:wasDerivedFrom	wikipedia-en:CollecTF?oldid=1091105184&ns=0
page length (characters) of wiki page	1933 (xsd:nonNegativeInteger)
title	CollecTF (en)
foaf:isPrimaryTopicOf	wikipedia-en:CollecTF
is Link from a Wikipage to another Wikipage of	DNA binding site Gene expression Ivan Erill
is foaf:primaryTopic of	wikipedia-en:CollecTF

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