This HTML5 document contains 122 embedded RDF statements represented using HTML+Microdata notation.

The embedded RDF content will be recognized by any processor of HTML5 Microdata.

Namespace Prefixes

PrefixIRI
n19http://www.ks.uiuc.edu/Research/namd/
dctermshttp://purl.org/dc/terms/
dbohttp://dbpedia.org/ontology/
foafhttp://xmlns.com/foaf/0.1/
n22http://dbpedia.org/resource/Molecular_Structure_of_Nucleic_Acids:
n28https://global.dbpedia.org/id/
dbpedia-trhttp://tr.dbpedia.org/resource/
n29https://www.molecularforecaster.com/
dbthttp://dbpedia.org/resource/Template:
rdfshttp://www.w3.org/2000/01/rdf-schema#
n24https://web.archive.org/web/20090325101042/http:/www.charmm.org/
n18https://docs.lammps.org/
n27https://genesilico.pl/SimRNAweb/
n14http://www.cp2k.org/
n26http://www.fos.su.se/~sasha/mdynamix/
n8http://
n16http://www.biomolecular-modeling.com/Ascalaph/
rdfhttp://www.w3.org/1999/02/22-rdf-syntax-ns#
n15http://www.biomolecular-modeling.com/Abalone/
owlhttp://www.w3.org/2002/07/owl#
n9http://www.chemcomp.com/
wikipedia-enhttp://en.wikipedia.org/wiki/
dbphttp://dbpedia.org/property/
dbchttp://dbpedia.org/resource/Category:
provhttp://www.w3.org/ns/prov#
xsdhhttp://www.w3.org/2001/XMLSchema#
wikidatahttp://www.wikidata.org/entity/
dbrhttp://dbpedia.org/resource/
n17http://genesilico.pl/software/stand-alone/
n13https://github.com/sunandanmukherjee/

Statements

Subject Item
dbr:DNA-binding_domain
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:DNA-binding_protein
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:DNA_nanotechnology
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Lexitropsin
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_molecular_graphics_systems
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_protein_structure_prediction_software
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Nucleic_acid_methods
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Nucleic_acid_structure_prediction
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
n22:_A_Structure_for_Deoxyribose_Nucleic_Acid
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_nucleic_acid_simulation_software
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
dbo:wikiPageRedirects
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:NUPACK
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:MacroModel
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Single-stranded_binding_protein
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Comparison_of_nucleic_acid_simulation_software
rdfs:label
Comparison of nucleic acid simulation software
rdfs:comment
This is a list of notable computer programs that are used for nucleic acids simulations. * Min – Optimization * MD – Molecular dynamics * MC – Monte Carlo * REM – Replica exchange method * Crt – Cartesian coordinates * Int – Internal coordinates * Exp – Explicit water * Imp – Implicit water * Lig – Ligand interactions * GPU – Hardware accelerated
dcterms:subject
dbc:Software_comparisons dbc:Computational_chemistry_software dbc:Molecular_modelling_software dbc:Molecular_dynamics_software
dbo:wikiPageID
22253193
dbo:wikiPageRevisionID
1082049420
dbo:wikiPageWikiLink
dbr:NAMD dbr:Molecular_Operating_Environment dbr:Molecule_editor dbr:List_of_sequence_alignment_software dbr:YASARA dbr:List_of_RNA_structure_prediction_software dbr:RNA dbr:Comparison_of_force_field_implementations dbr:Molecular_mechanics dbr:Protein dbc:Computational_chemistry_software dbr:MDynaMix dbr:Ascalaph_Designer dbr:Internal_coordinates dbr:Molecular_modeling_on_GPU dbr:List_of_software_for_nanostructures_modeling dbr:List_of_software_for_Monte_Carlo_molecular_modeling dbr:CP2K dbr:Quantum_chemistry_computer_programs dbr:Water_model dbr:List_of_gene_prediction_software dbr:Cartesian_coordinates dbr:Molecular_design_software dbr:Replica_exchange dbr:GNU_General_Public_License dbr:CHARMM dbr:Nucleic_acid_structure_prediction dbr:Molecular_graphics dbr:Software_license dbr:Ligand_(biochemistry) dbr:Monte_Carlo_method dbr:Ligand dbr:List_of_molecular_graphics_systems dbr:Global_optimization dbr:Abalone_(molecular_mechanics) dbr:Molecular_dynamics dbr:Force_field_(chemistry) dbr:Implicit_solvation dbr:Proprietary_software dbr:Nucleic_acid dbr:Molecular_modeling_on_GPUs dbr:Comparison_of_software_for_molecular_mechanics_modeling dbr:Optimization_(mathematics) dbr:Molecular_Modelling dbc:Molecular_dynamics_software dbr:AMBER dbr:DNA dbr:List_of_protein_structure_prediction_software dbc:Molecular_modelling_software dbc:Software_comparisons
dbo:wikiPageExternalLink
n8:www.molsoft.com n9: n8:dna.physics.ox.ac.uk n13:QRNAS.git n14: n15: n16:Ascalaph_Designer.html n8:ambermd.org n17:simrna n18:Packages_details.html%23pkg-cg-dna n17:qrnas n19: n8:casegroup.rutgers.edu n24: n8:www.yasara.org n26: n27: n29:products%23drug-discovery-anchor
owl:sameAs
wikidata:Q6630863 dbpedia-tr:Nükleik_asit_simülasyonu_yazılımlarının_karşılaştırması n28:4r7tz
dbp:wikiPageUsesTemplate
dbt:Proprietary dbt:Short_description dbt:Columns-list dbt:Free dbt:Yes dbt:No dbt:Reflist dbt:Science-software-stub
dbo:abstract
This is a list of notable computer programs that are used for nucleic acids simulations. * Min – Optimization * MD – Molecular dynamics * MC – Monte Carlo * REM – Replica exchange method * Crt – Cartesian coordinates * Int – Internal coordinates * Exp – Explicit water * Imp – Implicit water * Lig – Ligand interactions * GPU – Hardware accelerated
prov:wasDerivedFrom
wikipedia-en:Comparison_of_nucleic_acid_simulation_software?oldid=1082049420&ns=0
dbo:wikiPageLength
11097
foaf:isPrimaryTopicOf
wikipedia-en:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Comparison_of_software_for_molecular_mechanics_modeling
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Computational_chemistry
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Nucleic_acid_double_helix
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_RNA_structure_prediction_software
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Molecular_dynamics
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Biomolecular_structure
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Hoechst_stain
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Netropsin
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Single-strand_DNA-binding_protein
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_software_for_Monte_Carlo_molecular_modeling
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:List_of_software_for_nanostructures_modeling
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Molecular_design_software
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Molecular_modeling_on_GPUs
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Molecular_modelling
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Molecular_models_of_DNA
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
dbr:Outline_of_software
dbo:wikiPageWikiLink
dbr:Comparison_of_nucleic_acid_simulation_software
Subject Item
wikipedia-en:Comparison_of_nucleic_acid_simulation_software
foaf:primaryTopic
dbr:Comparison_of_nucleic_acid_simulation_software