About: APBS (software)

An Entity of Type: software, from Named Graph: http://dbpedia.org, within Data Space: dbpedia.org

APBS (previously also Advanced Poisson-Boltzmann Solver) is a free and open-source software for solving the equations of continuum electrostatics intended primarily for the large biomolecular systems. It is available under the MIT License. PDB2PQR prepares the protein structure files from Protein Data Bank for use with APBS. The preparation steps include, but aren't limited to adding missing heavy atoms to the structures and assigning charges from a number of force fields. The output file format is PQR and that's where the name of the software comes from.

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  • APBS (previously also Advanced Poisson-Boltzmann Solver) is a free and open-source software for solving the equations of continuum electrostatics intended primarily for the large biomolecular systems. It is available under the MIT License. PDB2PQR prepares the protein structure files from Protein Data Bank for use with APBS. The preparation steps include, but aren't limited to adding missing heavy atoms to the structures and assigning charges from a number of force fields. The output file format is PQR and that's where the name of the software comes from. (en)
  • APBS（以前の名称はAdvanced Poisson-Boltzmann Solver）は、主に大きな生体分子系の連続静電気学の方程式を解くための自由でオープンソースなソフトウェアである。MIT Licenseの下で入手できる。 PDB2PQRプログラムはProtein Data Bankからのタンパク質構造ファイルをAPBSプログラムと共に使えるようにする。この段階には、欠けている重原子の構造への追加、数多くの力場からの電荷の割り当てなどがある。出力ファイル形式はPQRである。 (ja)
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  • Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA ; Dolinsky TJ, Czodrowski P, Li H, Nielsen JE, Jensen JH, Klebe G, Baker NA (en)
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  • Molecular electrostatics (en)
dbp:license
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  • APBS and PDB2PQR (en)
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  • Linux (en)
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  • APBS (previously also Advanced Poisson-Boltzmann Solver) is a free and open-source software for solving the equations of continuum electrostatics intended primarily for the large biomolecular systems. It is available under the MIT License. PDB2PQR prepares the protein structure files from Protein Data Bank for use with APBS. The preparation steps include, but aren't limited to adding missing heavy atoms to the structures and assigning charges from a number of force fields. The output file format is PQR and that's where the name of the software comes from. (en)
  • APBS（以前の名称はAdvanced Poisson-Boltzmann Solver）は、主に大きな生体分子系の連続静電気学の方程式を解くための自由でオープンソースなソフトウェアである。MIT Licenseの下で入手できる。 PDB2PQRプログラムはProtein Data Bankからのタンパク質構造ファイルをAPBSプログラムと共に使えるようにする。この段階には、欠けている重原子の構造への追加、数多くの力場からの電荷の割り当てなどがある。出力ファイル形式はPQRである。 (ja)
rdfs:label
  • APBS (software) (en)
  • APBS (ソフトウェア) (ja)
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  • APBS and PDB2PQR (en)
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