St John the Baptist's Church is in Market Place, Atherton, Greater Manchester, England. It is an active Anglican parish church in the Leigh deanery in the archdeaconry of Salford, and diocese of Manchester. Together with St George's and St Philip's Churches in Atherton and St Michael and All Angels at Howe Bridge, the church is part of the United Benefice of Atherton and Hindsford with Howe Bridge. It is recorded in the National Heritage List for England as a designated Grade II listed building.