About: MatrixDB

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An Entity of Type : yago:WikicatPolysaccharides, within Data Space : dbpedia.org associated with source document(s)
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MatrixDB is a biological database focused on molecular interactions between extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of Sylvie Ricard-Blum at UMR5246, Claude Bernard University Lyon 1.

Attributes	Values
rdf:type	Thing schema:CreativeWork work wikidata:Q386724 Database dul:InformationObject Biological database yago:Abstraction100002137 yago:Carbohydrate114792703 yago:Chemical114806838 yago:Compound114818238 yago:Macromolecule114944888 yago:Material114580897 yago:Matter100020827 yago:Molecule114682133 yago:OrganicCompound114727670 yago:Part113809207 yago:PhysicalEntity100001930 yago:Polysaccharide114994004 yago:Relation100031921 yago:Substance100019613 yago:Thing100002452 yago:Unit109465459 yago:WikicatPolysaccharides
rdfs:label	MatrixDB (en)
rdfs:comment	MatrixDB is a biological database focused on molecular interactions between extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of Sylvie Ricard-Blum at UMR5246, Claude Bernard University Lyon 1. (en)
foaf:homepage	http://matrixdb.univ-lyon1.fr
foaf:depiction
dc:description	extracellularmatrix interactions database.
dct:subject	Biological databases Polysaccharides
Wikipage page ID	30339439 (xsd:integer)
Wikipage revision ID	979160451 (xsd:integer)
Link from a Wikipage to another Wikipage	Proteins BioGRID Human Protein Atlas Proteomics Standards Initiative Claude Bernard University Lyon 1 Biological databases Cytoscape Extracellular Polysaccharides Biological database Polysaccharides Human Protein Reference Database Human Proteome Organization UniGene dbr:PSI-MI dbr:International_Molecular_Exchange
Link from a Wikipage to an external page	http://www.icbms.fr/aspe http://matrixdb.univ-lyon1.fr
sameAs	MatrixDB MatrixDB MatrixDB MatrixDB
dbp:wikiPageUsesTemplate	dbt:Infobox_biodatabase dbt:Reflist
thumbnail	wiki-commons:Special:FilePath/Database.png?width=300
author	Emilie Chautard, Guillaume Launay, Nicolas Thierry-Mieg, Romain Salza, Franck Peysselon, Marie Fatoux-Ardore, Sofiane Badaoui, Sylvain Vallet, Lionel Ballut, Dorian Multedo, Sylvie Ricard-Blum. (en)
description	extracellular matrix interactions database. (en)
logo
Organism	All (en)
scope	Interactions DataBase, Biochemestry, Biacore, SPR (en)
standard	dbr:PSI-MI
title	MatrixDB (en)
url	http://matrixdb.univ-lyon1.fr
has abstract	MatrixDB is a biological database focused on molecular interactions between extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of Sylvie Ricard-Blum at UMR5246, Claude Bernard University Lyon 1. MatrixDB is linked with UniGene and the Human Protein Atlas. It also allows users to build customised tissue- and disease-specific interaction networks, which can be further analysed and visualised using Cytoscape or Medusa. MatrixDB is an active member of the Consortium (IMEx), a group of the major public providers of interaction data. Other participating databases include the Biomolecular Interaction Network Database (BIND), IntAct, the Molecular Interaction Database (MINT), MIPS, MPact, and BioGRID. The databases of IMEx work together to prevent duplications of effort, collecting data from non-overlapping sources and sharing the curated interaction data. The IMEx consortium also worked to develop the HUPO-PSI-MI XML standard format for annotating and exchanging interaction data. MatrixDB includes interaction data extracted from the literature by manual curation and offers access to relevant data involving extracellular proteins provided by IMEx partner databases through the PSICQUIC webservice, as well as data from the Human Protein Reference Database. (en)
laboratory	IBCP - UMR5086 CNRS / Univ Lyon1 - FRANCE (en)
pmid	20852260 (xsd:integer)
gold:hypernym	Database
prov:wasDerivedFrom	wikipedia-en:MatrixDB?oldid=979160451&ns=0
page length (characters) of wiki page	7809 (xsd:nonNegativeInteger)
title	MatrixDB (en)
foaf:isPrimaryTopicOf	wikipedia-en:MatrixDB
is Link from a Wikipage to another Wikipage of	Biomedical text mining IRefIndex
is foaf:primaryTopic of	wikipedia-en:MatrixDB

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