About: BY1

Facets (new session)
Description
Metadata
Settings
- Rule:
- Inverse Functional Properties:
- "Same As":

About: BY1 Goto Sponge NotDistinct Permalink

An Entity of Type : owl:Thing, within Data Space : dbpedia.org associated with source document(s)
QRcode icon

http://dbpedia.org/describe/?url=http%3A%2F%2Fdbpedia.org%2Fresource%2FBY1

BY1 is a taxonomically unidentified basidiomycete fungus. ITS sequencing has placed it in the Russulales and is referred to as a stereaceous basidiomycete. Chemotaxonomically supporting its placement in this group, it produces fomannoxins and vibralactones. The fungus' mycelia were isolated from dead aspen in Minnesota, USA. It is presumed to decompose wood by white rot. The fungus also produces fomannoxins and vibralactones. The famonnixins were found to be phytotoxic and the vibralactones were found to be antifungal.

Attributes	Values
rdfs:label	BY1 (en)
rdfs:comment	BY1 is a taxonomically unidentified basidiomycete fungus. ITS sequencing has placed it in the Russulales and is referred to as a stereaceous basidiomycete. Chemotaxonomically supporting its placement in this group, it produces fomannoxins and vibralactones. The fungus' mycelia were isolated from dead aspen in Minnesota, USA. It is presumed to decompose wood by white rot. The fungus also produces fomannoxins and vibralactones. The famonnixins were found to be phytotoxic and the vibralactones were found to be antifungal. (en)
name	BY1 (en)
dcterms:subject	Stereaceae Undescribed species
Wikipage page ID	54523200 (xsd:integer)
Wikipage revision ID	1008740816 (xsd:integer)
Link from a Wikipage to another Wikipage	NMR Allele Antifungal Polyene Russulales Prenyltransferase Fungus Minnesota Drosophila melanogaster Polyketide E. coli Fomannoxin Jena Microbial Resource Collection Stereaceae Undescribed species YMG agar ITS sequencing White rot Populus sect. Populus Aspergillus niger Clade Orsellinic acid Scalpel Chemotaxonomically Mycelium Vibralactone Polyketide synthase MALDI-TOF Stereaceous Phytotoxic Polyketidic Basidiomycete Ascomycete QRT-PCR dbr:Cloquetin dbr:Prenylphenol
sameAs	BY1 BY1
dbp:wikiPageUsesTemplate	dbt:Automatic_taxobox dbt:Reflist dbt:Short_description dbt:Taxonbar
binomial text	BY1 (en)
genus text	Incertae sedis (en)
image alt	diagrams of the structure of two polyenes formed by BY1 (en)
image caption	diagrams of the structure of two polyenes formed by BY1 (en)
species text	BY1 (en)
synonyms	Fungus BY1 (en)
taxon	Stereaceae (en)
has abstract	BY1 is a taxonomically unidentified basidiomycete fungus. ITS sequencing has placed it in the Russulales and is referred to as a stereaceous basidiomycete. Chemotaxonomically supporting its placement in this group, it produces fomannoxins and vibralactones. The fungus' mycelia were isolated from dead aspen in Minnesota, USA. It is presumed to decompose wood by white rot. The mycelium can be grown on YMG agar at room temperature (4 g/L d-glucose, 4 g/L yeast extract, 10 g/L malt extract, 18 g/L agar). The culture can be obtained at the Jena Microbial Resource Collection registration number SF:011241. When the mycelia is wounded by scalpel damage, a yellow pigment appears. These pigments were identified as polyenes by characteristic UV-Vis spectra. The structures of the polyenes were determined by NMR. They were identified as 1) (3Z,5E,7E,9E,11E,13Z,15E,17E)-18-methyl-19-oxoicosa-3,5,7,9,11,13,15,17-octaenoic acid; and 2) (3E,5Z,7E,9E,11E,13E,15Z,17E,19E)-20-methyl-21-oxodocosa-3,5,7,9,11,13,15,17,19-nonaenoic acid. The shorter polyene was found to be highly toxic against Drosophila melanogaster larvae. Feeding experiments with [1-13C]acetate revealed a polyketidic origin, and feeding experiments with l-[methyl-13C]methionine revealed methyl branching likely via S-adenosyl-l-methionine-dependent methyltransferase(s). Additionally, MALDI-TOF imaging at the mycelial wounding site identified these poylenes as localized at the wounded area. Two putative alleles of polyketide genes were identified, referred to as PPS1 and PPS2. QRT-PCR monitoring of PPS1 showed up-regulation of this gene after mycelial wounding. The domain architecture was the following for PPS1: KS, AT, DH, MT, KR, ACP, and thus was classified as a highly-reducing polyketide synthase (HR-PKS). This was the first characterized HR-PKS of basidiomycetic origin and forms its own clade in comparison to ascomycete HR-PKSs, bacterial polyene-forming PKSs, basidiomycete non-reducing PKSs, and ascomycete non-reducing PKSs. This research was highlighted in the media several times. The fungus also produces fomannoxins and vibralactones. The famonnixins were found to be phytotoxic and the vibralactones were found to be antifungal. Additionally, a new , termed , was identified from the fungus by NMR. Overexpression of two annotated non-reducing polyketide synthases (PKS1 and PKS2) in Aspergillus niger and subsequent characterization of the proteins identified them as orsellinic acid synthases. A prenyltransferase gene, termed BYPB, was overexpressed in E. coli and the subsequent protein was confirmed to add a prenyl group to orsellinic acid. (en)
prov:wasDerivedFrom	wikipedia-en:BY1?oldid=1008740816&ns=0
page length (characters) of wiki page	4776 (xsd:nonNegativeInteger)
foaf:isPrimaryTopicOf	wikipedia-en:BY1
is Link from a Wikipage to another Wikipage of	Fungus BY1 Stereaceae Agaricomycetes sp. BY1
is Wikipage redirect of	Fungus BY1 Agaricomycetes sp. BY1
is foaf:primaryTopic of	wikipedia-en:BY1

Faceted Search & Find service v1.17_git139 as of Feb 29 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 08.03.3330 as of Mar 19 2024, on Linux (x86_64-generic-linux-glibc212), Single-Server Edition (378 GB total memory, 51 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software