The 2016–17 Winthrop Eagles men's basketball team represented Winthrop University during the 2016–17 NCAA Division I men's basketball season. The Eagles, led by fifth-year head coach Pat Kelsey, played their home games at the Winthrop Coliseum in Rock Hill, South Carolina as members of the Big South Conference. They finished the season 26–7, 15–3 in Big South play to finish in a tie for the regular season Big South championship. As the No. 1 seed in the Big South tournament, they defeated Charleston Southern, Gardner–Webb, and Campbell to win the tournament championship. As a result, they received the conference's automatic bid to the NCAA tournament, their first bid since 2010. In the NCAA Tournament, they lost in the first round to Butler.