The 1899 Nebraska Bugeaters football team represented the University of Nebraska in the 1899 college football season. The team was coached by first-year head coach Alonzo Edwin Branch and played their home games at Antelope Field in Lincoln, Nebraska. They competed as an independent. Following the departure of Fielding H. Yost following the 1898 season, Nebraska hired Branch, a recent graduate of Williams College with little football coaching experience. In his only season as head coach, Branch led Nebraska to its first losing season, and only sub-.500 record in its first 38 years of football.