CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites.

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dbo:abstract
  • CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites. CollecTF entries are periodically submitted to NCBI for integration into RefSeq complete genome records as link-out features, maximizing the visibility of the data and enriching the annotation of RefSeq files with regulatory information. Seeking to facilitate comparative genomics and machine-learning analyses of regulatory interactions, in its initial release CollecTF provides domain-wide coverage of two TF families (LexA and Fur), as well as extensive representation for a clinically important bacterial family, the Vibrionaceae. (en)
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  • CollecTF (en)
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  • 42784181 (xsd:integer)
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  • 717797920 (xsd:integer)
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  • Kılıç, et al.
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  • 24234444 (xsd:integer)
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  • 2013 (xsd:integer)
dc:description
  • database of experimentally validated TF-binding sites
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http://purl.org/linguistics/gold/hypernym
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  • CollecTF is a database of transcription factor binding sites in the Bacteria domain. CollecTF compiles only experimentally validated TF-binding sites. This is accomplished through the manual curation of peer-reviewed literature with a special focus on the experimental process used to identify TF-binding sites. (en)
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  • CollecTF (en)
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