AMAP is a multiple sequence alignment program based on a new approach to multiple alignment called sequence annealing. This approach consists of building up the multiple alignment one match at a time, thereby circumventing many of the problems of progressive alignment. The AMAP parameters can be used to tune the sensivitiy-specificity tradeoff. The program can be used through the AMAP web server or as a standalone program which can be installed with the source code.

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dbpprop:abstract
  • AMAP is a multiple sequence alignment program based on a new approach to multiple alignment called sequence annealing. This approach consists of building up the multiple alignment one match at a time, thereby circumventing many of the problems of progressive alignment. The AMAP parameters can be used to tune the sensivitiy-specificity tradeoff. The program can be used through the AMAP web server or as a standalone program which can be installed with the source code.
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  • Ariel Schwartz , Lior Pachter
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  • Bioinformatics tool
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  • 2 (xsd:integer)
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  • Open source
dbpprop:name
  • AMAP
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rdfs:comment
  • AMAP is a multiple sequence alignment program based on a new approach to multiple alignment called sequence annealing. This approach consists of building up the multiple alignment one match at a time, thereby circumventing many of the problems of progressive alignment. The AMAP parameters can be used to tune the sensivitiy-specificity tradeoff. The program can be used through the AMAP web server or as a standalone program which can be installed with the source code.
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  • AMAP
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  • AMAP
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