About: Distance matrices in phylogeny

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Distance matrices are used in phylogeny as non-parametric distance methods and were originally applied to phenetic data using a matrix of pairwise distances. These distances are then reconciled to produce a tree (a phylogram, with informative branch lengths). The distance matrix can come from a number of different sources, including measured distance (for example from immunological studies) or , various pairwise distance formulae (such as euclidean distance) applied to discrete morphological characters, or genetic distance from sequence, restriction fragment, or allozyme data. For phylogenetic character data, raw distance values can be calculated by simply counting the number of pairwise differences in character states (Hamming distance).

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rdfs:label	Distance matrices in phylogeny (en) 距離行列法 (ja)
rdfs:comment	Distance matrices are used in phylogeny as non-parametric distance methods and were originally applied to phenetic data using a matrix of pairwise distances. These distances are then reconciled to produce a tree (a phylogram, with informative branch lengths). The distance matrix can come from a number of different sources, including measured distance (for example from immunological studies) or , various pairwise distance formulae (such as euclidean distance) applied to discrete morphological characters, or genetic distance from sequence, restriction fragment, or allozyme data. For phylogenetic character data, raw distance values can be calculated by simply counting the number of pairwise differences in character states (Hamming distance). (en) 距離行列法（きょりぎょうれつほう、Distance-matrix methods）または距離法（きょりほう、Distance methods, Distance-based methods）は、分類群同士の進化距離を定義して距離行列を作成し、距離の近い分類群同士を接続して系統樹を作成する系統推定法の総称。主な距離行列法には近隣結合法や非加重結合法などがある。 (ja)
dcterms:subject	Computational phylogenetics
Wikipage page ID	12955880 (xsd:integer)
Wikipage revision ID	1088473490 (xsd:integer)
Link from a Wikipage to another Wikipage	Mutation Nucleotide Non-parametric Ultrametric List of phylogenetics software Genetic distance Outgroup (cladistics) Synapomorphy Molecular clock NP-complete WPGMA Phenetic Horizontal gene transfer Bacteria DNA-DNA hybridization Least squares Least squares inference in phylogeny Amino acid Expected value Hamming distance Computational phylogenetics Heuristic Distance matrix Phylogenetic Data clustering Immunology Minimum evolution Neighbor joining Maximum likelihood Multiple sequence alignment Euclidean distance Linear Substitution matrix UPGMA Restriction fragment Symplesiomorphy Phylogram Signal noise Conservation (genetics) Interior node Jukes–Cantor model Allozyme Experimental control Neighbor-joining NeighborNet dbr:LogDet dbr:Morphometric_analysis dbr:Multiple_hits dbr:Node_density_effect dbr:Sequence_data dbr:Star_decomposition
sameAs	Distance matrices in phylogeny Distance matrices in phylogeny Distance matrices in phylogeny Distance matrices in phylogeny Distance matrices in phylogeny
dbp:wikiPageUsesTemplate	dbt:Anchor dbt:Cn dbt:Main dbt:Reflist dbt:Short_description dbt:Phylo
has abstract	Distance matrices are used in phylogeny as non-parametric distance methods and were originally applied to phenetic data using a matrix of pairwise distances. These distances are then reconciled to produce a tree (a phylogram, with informative branch lengths). The distance matrix can come from a number of different sources, including measured distance (for example from immunological studies) or , various pairwise distance formulae (such as euclidean distance) applied to discrete morphological characters, or genetic distance from sequence, restriction fragment, or allozyme data. For phylogenetic character data, raw distance values can be calculated by simply counting the number of pairwise differences in character states (Hamming distance). (en) 距離行列法（きょりぎょうれつほう、Distance-matrix methods）または距離法（きょりほう、Distance methods, Distance-based methods）は、分類群同士の進化距離を定義して距離行列を作成し、距離の近い分類群同士を接続して系統樹を作成する系統推定法の総称。主な距離行列法には近隣結合法や非加重結合法などがある。 (ja)
prov:wasDerivedFrom	wikipedia-en:Distance_matrices_in_phylogeny?oldid=1088473490&ns=0
page length (characters) of wiki page	14522 (xsd:nonNegativeInteger)
foaf:isPrimaryTopicOf	wikipedia-en:Distance_matrices_in_phylogeny
is Link from a Wikipage to another Wikipage of	Representative sequences List of phylogenetics software Substitution model Computational phylogenetics Dendrogram Distance matrix Source attribution Minimum evolution Maximum parsimony (phylogenetics) Phylogenetic inertia Phenetics Fitch-Margoliash algorithm
is Wikipage redirect of	Fitch-Margoliash algorithm
is foaf:primaryTopic of	wikipedia-en:Distance_matrices_in_phylogeny

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